STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008979annotation not available (323 aa)    
Predicted Functional Partners:
becn1
Beclin-1 isoform X1.
    
 0.934
LOC106608867
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.865
LOC106585470
Phosphoinositide 3-kinase regulatory subunit 4-like.
    
 0.865
PIK3R4
Phosphoinositide 3-kinase regulatory subunit 4-like.
    
 0.865
LOC106577844
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.865
LOC106587118
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.854
LOC100380690
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.854
LOC106569121
RB1-inducible coiled-coil protein 1-like isoform X1.
    
 0.847
LOC106599822
RB1-inducible coiled-coil protein 1-like isoform X1.
    
 0.847
LOC106603532
Autophagy-related protein 101-like.
    
 0.816
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.