STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009040annotation not available (194 aa)    
Predicted Functional Partners:
riox2
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.596
ENSSSAP00000053602
annotation not available
      
 0.596
alkbh1
Alkylated DNA repair protein alkB homolog 1 isoform X2.
   
  
 0.498
hspbap1
HSPB1-associated protein 1.
      
 0.467
LOC100380754
Coiled-coil domain-containing protein 6.
      
 0.442
LOC106577147
Coiled-coil domain-containing protein 6-like.
      
 0.442
LOC106604523
CDK2-associated and cullin domain-containing protein 1-like; Belongs to the cullin family.
      
 0.441
ENSSSAP00000033494
CDK2-associated and cullin domain-containing protein 1-like.
      
 0.441
LOC106612458
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
      
 0.435
LOC100194717
Eukaryotic peptide chain release factor subunit 1.
    
 
 0.432
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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