STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl4839S ribosomal protein L48, mitochondrial isoform X1. (220 aa)    
Predicted Functional Partners:
mrpl40
39S ribosomal protein L40, mitochondrial isoform X1.
   
 
 0.973
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.970
ict1
Peptidyl-tRNA hydrolase ICT1, mitochondrial; Essential peptidyl-tRNA hydrolase component of the mitochondrial large ribosomal subunit. Acts as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion, possibly in case of abortive elongation. May be involved in the hydrolysis of peptidyl-tRNAs that have been prematurely terminated and thus in the recycling of stalled mitochondrial ribosomes (By similarity). Belongs to the prokaryotic/mitochondrial release factor family. Mitochondrion-specific ribo [...]
   
 
 0.963
mrps18b
28S ribosomal protein S18b, mitochondrial.
   
 
 0.962
mrpl34
LOW QUALITY PROTEIN: 39S ribosomal protein L34, mitochondrial.
   
 
 0.962
LOC100194563
39S ribosomal protein L51, mitochondrial.
   
 
 0.956
ENSSSAP00000100315
annotation not available
   
 
 0.956
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.948
ptcd3
LOW QUALITY PROTEIN: pentatricopeptide repeat domain-containing protein 3, mitochondrial.
    
 
 0.943
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.942
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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