STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rag2V(D)J recombination-activating protein 2. (533 aa)    
Predicted Functional Partners:
rag1
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
  
 0.999
ENSSSAP00000021587
annotation not available
   
 0.988
ENSSSAP00000044001
annotation not available
   
 0.988
tmem232
Transmembrane protein 232 isoform X1.
   
 0.988
ENSSSAP00000018069
FIC domain containing.
      
 0.725
ficd
Adenosine monophosphate-protein transferase FICD.
      
 0.725
LOC106613845
Tyrosine-protein kinase.
   
  
 0.714
LOC106584369
Tyrosine-protein kinase.
   
  
 0.714
LOC106603528
Receptor-interacting serine/threonine-protein kinase 4-like.
      
 0.707
RIPK4
Receptor-interacting serine/threonine-protein kinase 4-like.
      
 0.707
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.