STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pak1ip1P21-activated protein kinase-interacting protein 1-like. (451 aa)    
Predicted Functional Partners:
LOC106562224
Ribosome biogenesis protein RLP24 like protein.
   
 
 0.975
LOC106571313
Ribosome production factor 2 homolog isoform X1.
   
 
 0.975
LOC106587425
Ribosome biogenesis protein RLP24 like protein.
   
 
 0.975
RPF2
Ribosome production factor 2 homolog.
   
 
 0.969
brix1
Brix domain-containing protein 2.
   
 
 0.964
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.963
rpf1
Ribosome production factor 1.
   
 
 0.958
ENSSSAP00000092906
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.955
LOC106579528
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.951
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.949
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.