STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607000Serotonin N-acetyltransferase-like. (279 aa)    
Predicted Functional Partners:
LOC106611414
Acetylserotonin O-methyltransferase-like.
   
 
 0.976
asmt
Acetylserotonin O-methyltransferase isoform X1.
   
 
 0.969
LOC106581942
Amine oxidase.
     
 0.917
LOC106586788
Amine oxidase.
     
 0.917
LOC106577031
Indoleamine 2,3-dioxygenase 2-like.
     
 0.911
LOC106579858
Indoleamine 2,3-dioxygenase 2-like isoform X1.
     
 0.911
LOC106585586
Indoleamine 2,3-dioxygenase 2-like.
     
 0.911
asmtl
N-acetylserotonin O-methyltransferase-like protein isoform X1.
  
  
 0.762
LOC106587468
Tryptophan 5-hydroxylase 1-like.
   
  
 0.675
LOC106561539
Tryptophan 5-hydroxylase 2-like.
   
  
 0.634
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.