STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERMP1Endoplasmic reticulum metallopeptidase 1 isoform X3. (884 aa)    
Predicted Functional Partners:
LOC106601362
Erythropoietin receptor-like.
    
 0.635
epor
Erythropoietin receptor.
    
 0.635
LOC106578748
Threonine aspartase 1-like.
   
  
 0.604
ngly1
peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X1.
      
 0.582
LOC106593828
Translocation protein SEC63 homolog isoform X2.
      
 0.558
LOC106567829
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.542
LOC106563029
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.542
LOC106612559
LOW QUALITY PROTEIN: sortilin-related receptor-like.
     
 0.527
sorl1
Sortilin-related receptor isoform X1.
     
 0.527
comd4
COMM domain-containing protein 4 isoform X1.
     
 0.524
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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