STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppme1Protein phosphatase methylesterase 1. (396 aa)    
Predicted Functional Partners:
LOC106612458
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.989
LOC106562890
Serine/threonine-protein phosphatase.
    
 0.885
LOC106603816
Serine/threonine-protein phosphatase.
    
 0.885
ENSSSAP00000034513
Protein phosphatase 2, catalytic subunit, beta isozyme.
    
 0.885
pp2aa
Serine/threonine-protein phosphatase.
    
 0.885
ENSSSAP00000056869
annotation not available
    
 0.885
LOC106567527
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.
    
 0.885
nudt12
Peroxisomal NADH pyrophosphatase NUDT12.
    
 0.875
LOC106563686
Malignant fibrous histiocytoma-amplified sequence 1 homolog.
    
 
 0.825
LOC106568162
Malignant fibrous histiocytoma-amplified sequence 1 homolog.
    
 
 0.825
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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