STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569867Myocyte-specific enhancer factor 2D homolog isoform X1. (578 aa)    
Predicted Functional Partners:
myog
Myogenin.
    
 0.795
mef2b
Myocyte-specific enhancer factor 2B.
    
0.769
LOC106613729
Myocyte-specific enhancer factor 2B-like.
    
0.769
cabin1
Calcineurin-binding protein cabin-1 isoform X3.
    
 
 0.674
ENSSSAP00000110607
annotation not available
    
 
 0.674
LOC106612166
Homeobox protein Nkx-2.5-like.
    
 
 0.669
LOC106604305
Homeobox protein Nkx-2.5-like.
    
 
 0.669
LOC106580134
Myocyte-specific enhancer factor 2C-like isoform X4.
  
0.635
LOC100500787
Myocyte-specific enhancer factor 2C isoform X4.
  
0.635
mef2a
Myocyte-specific enhancer factor 2A isoform X4.
  
0.633
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.