STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602358SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like. (338 aa)    
Predicted Functional Partners:
pole3
DNA-directed DNA polymerase epsilon 3.
    
 0.950
LOC106611229
Bromodomain adjacent to zinc finger domain protein 1A-like isoform X1.
    
 0.945
LOC106602003
Bromodomain adjacent to zinc finger domain protein 1A-like isoform X2.
    
 0.945
LOC106580871
Tyrosine-protein kinase BAZ1B-like isoform X1.
   
 0.908
LOC106612575
Tyrosine-protein kinase BAZ1B-like.
   
 0.908
LOC106561369
Cat eye syndrome critical region protein 2-like isoform X1.
    
 0.884
LOC106573190
Cat eye syndrome critical region protein 2-like.
    
 0.884
LOC106603709
Remodeling and spacing factor 1-like.
   
 0.866
LOC106612877
Remodeling and spacing factor 1-like isoform X1.
   
 0.866
LOC106567587
Remodeling and spacing factor 1-like isoform X1.
   
 0.866
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]