STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106562896Mitogen-activated protein kinase kinase kinase 1-like isoform X2. (1317 aa)    
Predicted Functional Partners:
map2k4
Dual specificity mitogen-activated protein kinase kinase 4 isoform X2; Belongs to the protein kinase superfamily.
   
0.991
LOC106589490
Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.
   
0.991
LOC106592035
TNF receptor-associated factor 6-like.
   
 0.984
LOC106562692
TNF receptor-associated factor 6-like.
   
 0.984
mp2k2
Dual specificity mitogen-activated protein kinase kinase 2 isoform X1; Belongs to the protein kinase superfamily.
   
0.970
map2k1
Dual specificity mitogen-activated protein kinase kinase 1.
   
0.970
LOC106569535
Dual specificity mitogen-activated protein kinase kinase 2-like; Belongs to the protein kinase superfamily.
   
0.970
LOC106600441
Dual specificity mitogen-activated protein kinase kinase 2-like; Belongs to the protein kinase superfamily.
   
0.970
LOC106563020
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.968
LOC106563303
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.968
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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