STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009364Era-like 12S mitochondrial rRNA chaperone 1. (448 aa)    
Predicted Functional Partners:
mrps10
28S ribosomal protein S10, mitochondrial.
  
 0.987
mrps18b
28S ribosomal protein S18b, mitochondrial.
   
 0.987
ptcd3
LOW QUALITY PROTEIN: pentatricopeptide repeat domain-containing protein 3, mitochondrial.
    
 0.986
mrps6
28S ribosomal protein S6, mitochondrial.
   
 0.980
mrps26
28S ribosomal protein S26, mitochondrial.
    
 0.980
mrps27
28S ribosomal protein S27, mitochondrial.
   
 0.980
mrps25
28S ribosomal protein S25, mitochondrial.
    
 0.978
mrps18c
28S ribosomal protein S18c, mitochondrial isoform X1.
   
 0.975
ENSSSAP00000094764
annotation not available
   
 0.975
LOC106574616
28S ribosomal protein S9, mitochondrial-like.
  
 0.966
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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