STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106562141CD276 antigen-like isoform X1. (320 aa)    
Predicted Functional Partners:
cd40l
CD40 ligand; Belongs to the tumor necrosis factor family.
      
 0.599
LOC106572390
Tumor necrosis factor receptor superfamily member 9-like isoform X1.
      
 0.598
LOC106586938
Cytotoxic T-lymphocyte protein 4-like.
     
 0.592
LOC106582536
T-cell-specific surface glycoprotein CD28-like.
     
 0.592
ENSSSAP00000095185
annotation not available
    
0.544
LOC106582047
V-set domain-containing T-cell activation inhibitor 1-like.
     
0.532
vtcn1
V-set domain-containing T-cell activation inhibitor 1.
     
0.532
ENSSSAP00000042731
annotation not available
      
 0.502
LOC100136450
CD8 alpha precursor.
      
 0.502
LOC106605731
Uncharacterized LOC106605731.
    
 0.497
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.