STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603496T-box transcription factor TBX6L-like isoform X1. (590 aa)    
Predicted Functional Partners:
LOC106608038
Mesogenin-1-like.
   
 0.798
wnt3a
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.631
LOC106599872
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.631
LOC106606274
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.572
LOC106576696
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.572
LOC106579330
Homeobox protein MOX-1-like.
    
 
 0.539
LOC106589309
Homeobox protein MOX-1-like.
    
 
 0.539
LOC106608032
Homeobox protein Mix.1-like isoform X1.
   
 0.465
LOC106607569
Protein ripply2-like.
   
  
 0.452
LOC106571226
Protein ripply2-like.
   
  
 0.452
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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