STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009385annotation not available (68 aa)    
Predicted Functional Partners:
sc61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.601
ENSSSAP00000029361
annotation not available
   
 
 0.601
ENSSSAP00000066605
annotation not available
   
 
 0.601
LOC106573934
Small glutamine-rich tetratricopeptide repeat-containing protein alpha-like.
    
 0.511
LOC106613600
Small glutamine-rich tetratricopeptide repeat-containing protein alpha-like.
    
 0.511
LOC106563142
Small glutamine-rich tetratricopeptide repeat-containing protein beta-like.
    
 0.511
LOC106567618
Small glutamine-rich tetratricopeptide repeat-containing protein beta-like isoform X2.
    
 0.511
ENSSSAP00000088944
Tetratricopeptide repeat domain 33.
    
  0.449
LOC106568686
Tetratricopeptide repeat protein 33-like isoform X1.
    
  0.449
LOC106590555
Protein transport protein Sec61 subunit gamma.
   
 
  0.426
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.