STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0232Uncharacterized protein KIAA0232 homolog. (1337 aa)    
Predicted Functional Partners:
sympk
Symplekin.
   
 0.966
cpsf3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.965
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
   
 0.918
LOC106570221
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.891
LOC106588592
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.891
LOC106608196
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.890
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.890
LOC106563615
pre-mRNA 3'-end-processing factor FIP1-like isoform X1.
    
 0.889
fip1l1
pre-mRNA 3'-end-processing factor FIP1 isoform X5.
    
 0.889
LOC106583838
Cas scaffolding protein family member 4-like isoform X1.
   
 0.885
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.