STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009430annotation not available (87 aa)    
Predicted Functional Partners:
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.737
cnnm2
Metal transporter CNNM2 isoform X1.
    
 
 0.462
ENSSSAP00000017433
Cyclin and CBS domain divalent metal cation transport mediator 2b.
    
 
 0.462
CNNM4
Metal transporter CNNM4-like.
    
 
 0.462
LOC106569301
Metal transporter CNNM3-like isoform X2.
    
 
 0.462
LOC106570814
Metal transporter CNNM4-like.
    
 
 0.462
LOC106584879
Metal transporter CNNM4-like.
    
 
 0.462
cnnm3
Metal transporter CNNM3 isoform X1.
    
 
 0.462
LOC106562917
Metal transporter CNNM4-like isoform X4.
    
 
 0.462
LOC106588670
Metal transporter CNNM2-like isoform X2.
    
 
 0.462
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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