Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009502annotation not available (884 aa)    
Predicted Functional Partners:
hus1
Checkpoint protein; Belongs to the HUS1 family.
    
   0.596
ENSSSAP00000073297
annotation not available
      
 0.559
ift80
LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog.
      
 0.559
LOC106583051
Forkhead box protein P4-like isoform X5.
      
 0.559
LOC106563455
Cation channel sperm-associated protein 1-like isoform X1.
      
 0.555
LOC106613072
Serpin H1-like; Belongs to the serpin family.
      
 0.554
LOC106581278
Serpin H1-like; Belongs to the serpin family.
      
 0.554
LOC106604953
Histone deacetylase 3.
    
   0.545
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
   0.545
ccbe1
Collagen and calcium-binding EGF domain-containing protein 1 isoform X1.
      
 0.529
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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