ENSSSAP00000009525 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000009525

annotation not available (562 aa)

Predicted Functional Partners:

LOC106564013

0.972

LOC106599575

0.740

LOC106568870

0.740

LOC106610842

0.732

eif2ak4

0.732

LOC100195543

0.652

LOC106589587

0.652

LOC106574637

0.610

eif5b

0.610

LOC106590489

0.607

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000009525	LOC100195543	ENSSSAP00000009525	ENSSSAP00000001246	annotation not available	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	0.652
ENSSSAP00000009525	LOC106564013	ENSSSAP00000009525	ENSSSAP00000008489	annotation not available	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.972
ENSSSAP00000009525	LOC106568870	ENSSSAP00000009525	ENSSSAP00000105643	annotation not available	5'-3' exoribonuclease 1.	0.740
ENSSSAP00000009525	LOC106574637	ENSSSAP00000009525	ENSSSAP00000029828	annotation not available	Eukaryotic translation initiation factor 5B-like.	0.610
ENSSSAP00000009525	LOC106589587	ENSSSAP00000009525	ENSSSAP00000063372	annotation not available	Eukaryotic translation initiation factor 2-alpha kinase 1-like isoform X1.	0.652
ENSSSAP00000009525	LOC106590489	ENSSSAP00000009525	ENSSSAP00000110151	annotation not available	Eukaryotic translation initiation factor 2 subunit 3-like.	0.607
ENSSSAP00000009525	LOC106599575	ENSSSAP00000009525	ENSSSAP00000072262	annotation not available	5'-3' exoribonuclease 1.	0.740
ENSSSAP00000009525	LOC106610842	ENSSSAP00000009525	ENSSSAP00000010226	annotation not available	Eukaryotic translation initiation factor 2-alpha kinase 4-like isoform X3.	0.732
ENSSSAP00000009525	eif2ak4	ENSSSAP00000009525	ENSSSAP00000039522	annotation not available	Eukaryotic translation initiation factor 2-alpha kinase 4.	0.732
ENSSSAP00000009525	eif5b	ENSSSAP00000009525	ENSSSAP00000056203	annotation not available	Eukaryotic translation initiation factor 5B.	0.610
LOC100195543	ENSSSAP00000009525	ENSSSAP00000001246	ENSSSAP00000009525	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	annotation not available	0.652
LOC100195543	LOC106564013	ENSSSAP00000001246	ENSSSAP00000008489	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.548
LOC100195543	LOC106574637	ENSSSAP00000001246	ENSSSAP00000029828	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 5B-like.	0.524
LOC100195543	LOC106589587	ENSSSAP00000001246	ENSSSAP00000063372	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 2-alpha kinase 1-like isoform X1.	0.901
LOC100195543	LOC106590489	ENSSSAP00000001246	ENSSSAP00000110151	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 2 subunit 3-like.	0.810
LOC100195543	eif2ak4	ENSSSAP00000001246	ENSSSAP00000039522	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 2-alpha kinase 4.	0.927
LOC100195543	eif5b	ENSSSAP00000001246	ENSSSAP00000056203	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	Eukaryotic translation initiation factor 5B.	0.524
LOC106564013	ENSSSAP00000009525	ENSSSAP00000008489	ENSSSAP00000009525	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	annotation not available	0.972
LOC106564013	LOC100195543	ENSSSAP00000008489	ENSSSAP00000001246	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 2-alpha kinase 1 isoform X1.	0.548
LOC106564013	LOC106568870	ENSSSAP00000008489	ENSSSAP00000105643	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	5'-3' exoribonuclease 1.	0.511