STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009531annotation not available (144 aa)    
Predicted Functional Partners:
tn13b
Tumor necrosis factor ligand superfamily member 13B isoform X1; Belongs to the tumor necrosis factor family.
    
 0.977
LOC106586658
Tumor necrosis factor ligand superfamily member 13B-like; Belongs to the tumor necrosis factor family.
    
 0.977
ENSSSAP00000050466
annotation not available
    
 0.948
LOC106591189
Tumor necrosis factor ligand superfamily member 13B-like isoform X2.
    
 0.948
pou2af1
POU domain class 2-associating factor 1 isoform X1.
   
  
 0.774
tnfrsf13b
Tumor necrosis factor receptor superfamily member 13B isoform X1.
   
  
 0.619
LOC106589221
Tumor necrosis factor receptor superfamily member 13B-like.
   
  
 0.619
cd40l
CD40 ligand; Belongs to the tumor necrosis factor family.
      
 0.595
ENSSSAP00000011514
annotation not available
    
 0.533
tnfsf13
Tumor necrosis factor ligand superfamily member 13 isoform X1; Belongs to the tumor necrosis factor family.
    
 0.533
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.