STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605758Leukocyte receptor cluster member 1 homolog. (282 aa)    
Predicted Functional Partners:
ENSSSAP00000028410
annotation not available
   
 0.920
LOC106604197
pre-mRNA-splicing factor SLU7-like.
    
 0.833
LOC106563918
Nuclear pore complex protein Nup155-like isoform X1.
   
 0.811
NU107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.801
cssa13hxorf56
UPF0428 protein CXorf56 homolog.
    
  0.799
cdc40
pre-mRNA-processing factor 17.
    
 0.795
syf2
Pre-mRNA-splicing factor SYF2.
    
 0.795
LOC106571808
pre-mRNA-processing factor 17-like.
    
 0.795
LOC106610898
pre-mRNA-splicing factor syf2-like isoform X1.
    
 0.795
NUP214
Nuclear pore complex protein Nup214-like isoform X2.
    
 0.785
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.