STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
morg1Salmo salar Mitogen-activated protein kinase organizer 1 (morg1), mRNA. (327 aa)    
Predicted Functional Partners:
LOC106591093
G patch domain-containing protein 1-like.
    
 
 0.957
SF3B4
Splicing factor 3B subunit 4-like.
    
 
 0.945
LOC106588579
Splicing factor 3B subunit 4-like.
    
 
 0.945
LOC100380699
pre-mRNA-processing-splicing factor 8.
    
   0.908
LOC106612861
pre-mRNA-processing-splicing factor 8-like.
    
   0.908
lamtor3
Mitogen-activated protein kinase kinase 1-interacting protein 1.
   
 0.817
ENSSSAP00000031645
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
   
 0.817
ENSSSAP00000088304
annotation not available
   
 
 0.749
aqr
Intron-binding protein aquarius.
    
 
 0.692
LOC106596021
Serine/threonine-protein kinase B-raf-like.
    
 0.664
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.