STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRIM_SALSAFerritin, middle subunit; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation; Belongs to the ferritin family. (178 aa)    
Predicted Functional Partners:
ncoa4
Nuclear receptor coactivator 4 isoform X1.
     
  0.900
LOC106576735
Nuclear receptor coactivator 4-like isoform X1.
     
  0.900
gak
cyclin-G-associated kinase isoform X1.
     
 0.654
ENSSSAP00000028868
Dual oxidase 2-like.
      
 0.582
tmprss9
Transmembrane protease serine 9 isoform X3; Belongs to the peptidase S1 family.
    
 0.559
LOC106600402
Peroxiredoxin-1-like.
  
  
 0.551
tdx
Peroxiredoxin isoform X1.
  
  
 0.539
prs10
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
   
  
 0.530
LOC106613943
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
      
 0.501
grp
Gastrin-releasing peptide isoform X1.
      
 0.499
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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