STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106567815Glutaminyl-peptide cyclotransferase-like isoform X1. (402 aa)    
Predicted Functional Partners:
nudt22
Nucleoside diphosphate-linked moiety X motif 22 isoform X1.
      
 0.588
ufm1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes. Belongs to the UFM1 family.
      
 0.510
znhit6
Box C/D snoRNA protein 1.
      
 0.510
trabd
traB domain-containing protein isoform X1.
      
 0.503
ostm1
Osteopetrosis-associated transmembrane protein 1 isoform X1.
   
  
 0.478
LOC106571796
Osteopetrosis-associated transmembrane protein 1-like isoform X2.
   
  
 0.478
LOC106561071
Transmembrane emp24 domain-containing protein 6-like.
      
 0.455
LOC106561072
Transmembrane emp24 domain-containing protein 6-like isoform X1.
      
 0.455
LOC106605273
Cysteine-rich venom protein ophanin-like; Belongs to the CRISP family.
   
 
 0.446
ENSSSAP00000060601
annotation not available
   
 
 0.446
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (10%) [HD]