STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609556Serine/threonine-protein phosphatase CPPED1-like isoform X1. (313 aa)    
Predicted Functional Partners:
nudt13
Nucleoside diphosphate-linked moiety X motif 13.
    
 0.784
hdd1a
Haloacid dehalogenase-like hydrolase domain-containing protein 1A.
  
  
 0.588
ENSSSAP00000110028
annotation not available
  
  
 0.588
ENSSSAP00000068416
annotation not available
      
 0.555
pnpla4
Patatin-like phospholipase domain-containing protein 4.
      
 0.555
LOC106581428
Centrosomal protein of 57 kDa-like isoform X1.
      
 0.549
p5cs
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.546
LOC106579029
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.546
LOC106589322
Delta-1-pyrroline-5-carboxylate synthase-like.
     
 0.546
LOC106569596
NAD kinase-like isoform X1.
    
  0.528
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.