STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf280dZinc finger protein 280D isoform X1. (1000 aa)    
Predicted Functional Partners:
LOC100196869
PHD finger protein 20-like protein 1 isoform X6.
   
 0.634
LOC106595961
PHD finger protein 20-like protein 1.
   
 0.634
LOC106591863
E3 ubiquitin-protein ligase RNF216-like.
    
 
 0.608
LOC106583459
RNA pseudouridylate synthase domain-containing protein 4-like.
    
 
 0.605
wdr70
WD repeat-containing protein 70.
      
 0.599
LOC106563485
U4/U6.U5 tri-snRNP-associated protein 1-like.
    
 0.598
LOC106603146
U4/U6.U5 tri-snRNP-associated protein 1-like.
    
 0.598
LOC106590980
T-box transcription factor TBX22-like.
      
 0.597
cssa24h4orf22
Uncharacterized protein C4orf22 homolog.
      
 0.595
ttll7
Tubulin polyglutamylase TTLL7 isoform X1.
      
 0.593
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.