STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561398Unconventional prefoldin RPB5 interactor 1-like isoform X1. (505 aa)    
Predicted Functional Partners:
uxt
Ubiquitously transcribed Tetratricopeptide repeat.
    
 
 0.903
pih1d1
PIH1 domain-containing protein 1.
    
 
 0.881
pfdn6
Prefoldin subunit 6.
    
 
 0.850
LOC106569462
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 
 0.829
LOC106573578
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like.
    
 
 0.829
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.819
wdr92
WD repeat-containing protein 92 isoform X1.
    
 
 0.811
pfd2
Prefoldin subunit 2.
    
 
 0.810
pfdn2
Prefoldin subunit 2 isoform X1.
    
 
 0.810
pdrg1
P53 and DNA damage-regulated protein 1.
    
 
 0.781
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.