STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldh6a1Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X2. (525 aa)    
Predicted Functional Partners:
ENSSSAP00000022496
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like.
   
 0.979
LOC106574493
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like.
   
 0.979
LOC106570522
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.979
aldh3a2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.955
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.946
LOC106613594
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.946
LOC106575421
propionyl-CoA carboxylase beta chain, mitochondrial-like.
   
 0.945
ECHDC1
ethylmalonyl-CoA decarboxylase-like; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.941
LOC106563087
Short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1.
   
 0.941
LOC106580430
3-ketoacyl-CoA thiolase, mitochondrial-like; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.939
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.