STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106567811Cysteinyl leukotriene receptor 2-like. (358 aa)    
Predicted Functional Partners:
LOC106580086
Guanine nucleotide-binding protein G(Q) subunit alpha-like.
    
 0.804
LOC106580085
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.804
GNA14
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.804
ENSSSAP00000072406
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.791
LOC106584405
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.791
LOC106562028
Guanine nucleotide-binding protein G(Q) subunit alpha-like isoform X1.
    
 0.784
LOC106568348
Guanine nucleotide-binding protein G(Q) subunit alpha-like.
    
 0.784
LOC106562041
Guanine nucleotide-binding protein subunit alpha-14-like.
    
  0.725
snta1
Alpha-1-syntrophin.
    
 
 0.703
LOC106582705
Diphosphoinositol polyphosphate phosphohydrolase 1.
      
 0.688
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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