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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564452Zinc finger protein GLIS2-like isoform X1. (522 aa)    
Predicted Functional Partners:
Ctnna2
Catenin alpha 2.
     
 0.692
mta1
Metastasis-associated protein MTA1.
    
 0.681
LOC100380853
Transposon Tf2-1 polyprotein.
    
 0.627
LOC106604495
Integrin alpha-6-like; Belongs to the integrin alpha chain family.
     
 0.610
ITGA6
Integrin alpha-6-like isoform X1; Belongs to the integrin alpha chain family.
     
 0.610
LOC106600084
Integrin alpha-6-like isoform X1; Belongs to the integrin alpha chain family.
     
 0.610
tyba
Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family.
      
 0.550
ENSSSAP00000059180
annotation not available
    
 0.529
ENSSSAP00000066521
annotation not available
    
 0.529
ENSSSAP00000105619
annotation not available
    
 0.529
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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