STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563461Ribosomal protein S6 kinase alpha-5. (813 aa)    
Predicted Functional Partners:
LOC106611337
Non-specific serine/threonine protein kinase.
  
  
 
0.904
LOC106603776
Ribosomal protein S6 kinase.
  
  
 
0.903
LOC106591110
Cyclic AMP-dependent transcription factor ATF-4-like.
     
 0.902
LOC106607446
Cyclic AMP-dependent transcription factor ATF-4-like.
     
 0.902
LOC106564394
Cyclic AMP-dependent transcription factor ATF-4-like.
     
 0.902
atf4
Cyclic AMP-dependent transcription factor ATF-4.
     
 0.902
use1
Vesicle transport protein USE1.
    
 0.859
LOC106603635
Centromere/kinetochore protein zw10 homolog isoform X3.
    
 0.840
LOC106561402
Mitogen-activated protein kinase.
   
0.833
LOC106576243
Mitogen-activated protein kinase.
   
0.833
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.