STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564708Regulating synaptic membrane exocytosis protein 3-like isoform X1. (459 aa)    
Predicted Functional Partners:
LOC106574738
Peripheral plasma membrane protein CASK-like.
   
 0.703
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
   
 0.703
cask
Peripheral plasma membrane protein CASK isoform X10; Belongs to the MAGUK family.
   
 0.703
CASK
Peripheral plasma membrane protein CASK-like isoform X11; Belongs to the MAGUK family.
   
 0.703
UNC13B
Protein unc-13 homolog B-like isoform X20.
    
 0.668
LOC106584438
Protein unc-13 homolog A-like isoform X9.
    
 0.668
LOC106613770
Protein unc-13 homolog A-like.
    
 0.668
LOC106563215
Protein unc-13 homolog B-like isoform X2.
    
 0.668
LOC106562407
Protein unc-13 homolog C-like.
    
 0.668
LOC106570851
Protein unc-13 homolog B-like.
    
 0.668
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.