STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skor2SKI family transcriptional corepressor 2 isoform X1. (260 aa)    
Predicted Functional Partners:
loxhd1
Lipoxygenase homology domain-containing protein 1.
      
 0.730
rnf165
RING finger protein 165 isoform X1.
      
 0.659
slc39a6
Zinc transporter ZIP6.
      
 0.641
LOC106561350
CCR4-NOT transcription complex subunit 1-like isoform X11.
      
 0.631
ENSSSAP00000080004
CCR4-NOT transcription complex, subunit 1.
      
 0.631
LOC106611149
Psychosine receptor-like.
      
 0.622
LOC106573649
Protein NDRG4 isoform X4.
      
 0.622
gnao1
Guanine nucleotide-binding protein G(O) subunit alpha isoform X2.
      
 0.622
LOC106560919
Protein NDRG4-like isoform X2.
      
 0.622
cadps2
Calcium-dependent secretion activator 2 isoform X2.
      
 0.622
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.