STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569863Cytosolic non-specific dipeptidase-like. (482 aa)    
Predicted Functional Partners:
upb1
Beta-ureidopropionase isoform X1.
    
 0.945
LOC106564456
4-aminobutyrate aminotransferase, mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.943
GABT-2
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase.
  
 0.943
hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
    
 0.925
ENSSSAP00000022096
Nuclear envelope pore membrane protein POM 121-like.
   
 
 0.925
LOC106587893
Histidine decarboxylase-like.
   
 
 0.925
LOC106576224
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
    
 0.925
gadl1
Glutamate decarboxylase-like protein 1.
   
 
 0.921
LOC106581773
Glutamate decarboxylase 1-like isoform X1.
   
 
 0.921
gad2
Glutamate decarboxylase 2.
   
 
 0.921
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.