STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grwd1Glutamate-rich WD repeat-containing protein 1. (477 aa)    
Predicted Functional Partners:
noc2l
Nucleolar complex protein 2 homolog.
   
 
 0.986
LOC100380648
RNA helicase.
   
 
 0.948
wdr36
WD repeat-containing protein 36.
   
 
 0.944
ddx56
Probable ATP-dependent RNA helicase DDX56 isoform X1.
   
 
 0.939
bysl
Bystin-like.
   
  
 0.938
LOC106568368
WD repeat-containing protein 36-like.
   
 
 0.937
LOC106609534
Ribosomal L1 domain-containing protein 1-like isoform X1.
   
 
 0.936
ENSSSAP00000027821
PWP1 homolog, endonuclein.
   
  
0.936
LOC106576395
Periodic tryptophan protein 1 homolog.
   
  
0.936
rsl1d1
LOW QUALITY PROTEIN: ribosomal L1 domain-containing protein 1.
   
 
 0.936
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.