STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605765Uncharacterized protein LOC106605765 isoform X1. (262 aa)    
Predicted Functional Partners:
noc2l
Nucleolar complex protein 2 homolog.
   
 
 0.958
ddx56
Probable ATP-dependent RNA helicase DDX56 isoform X1.
   
 
 0.922
ENSSSAP00000092906
Nucleolar protein interacting with the FHA domain of MKI67.
   
  
 0.908
rrp12
RRP12-like protein isoform X2.
   
  
 0.895
brix1
Brix domain-containing protein 2.
   
  
 0.894
wdr46
WD repeat-containing protein 46.
   
    0.894
LOC106579528
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.893
noc4l
Nucleolar complex protein 4 homolog.
   
   0.890
wdr36
WD repeat-containing protein 36.
   
 
 0.884
LOC106568368
WD repeat-containing protein 36-like.
   
 
 0.884
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.