STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009813Ribitol xylosyltransferase 1. (262 aa)    
Predicted Functional Partners:
fktn
Fukutin.
  
 
 0.732
pomgnt1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
    
 
 0.696
pomt2
Protein O-mannosyl-transferase 2 isoform X1.
   
  
 0.614
pomt1
Protein O-mannosyl-transferase 1 isoform X1.
   
  
 0.608
b3galnt2
Hexosyltransferase.
   
  
 0.605
LOC106576502
Protein FAM3C-like.
    
 
 0.601
fkrp
Fukutin-related protein isoform X1.
      
 0.601
pomk
Kinase-like protein SgK196.
      
 0.601
gmppb
Mannose-1-phosphate guanyltransferase beta.
      
 0.599
dolk
Dolichol kinase isoform X1.
      
 0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.