LOC106564723 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106564723

Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2. (441 aa)

Predicted Functional Partners:

LOC106604910

0.872

LOC106563760

0.872

LOC106562896

0.866

map3k1

0.866

ENSSSAP00000000211

0.864

LOC106560362

0.864

mapk8

0.864

mapk10

0.864

LOC106579004

0.864

LOC106576863

0.864

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000000211	LOC106562896	ENSSSAP00000000211	ENSSSAP00000009307	annotation not available	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	0.673
ENSSSAP00000000211	LOC106563760	ENSSSAP00000000211	ENSSSAP00000088671	annotation not available	Mitogen-activated protein kinase.	0.905
ENSSSAP00000000211	LOC106564723	ENSSSAP00000000211	ENSSSAP00000009817	annotation not available	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.864
ENSSSAP00000000211	LOC106604910	ENSSSAP00000000211	ENSSSAP00000059694	annotation not available	Mitogen-activated protein kinase.	0.905
ENSSSAP00000000211	map3k1	ENSSSAP00000000211	ENSSSAP00000070395	annotation not available	Mitogen-activated protein kinase kinase kinase 1 isoform X2.	0.673
LOC106560362	LOC106562896	ENSSSAP00000001029	ENSSSAP00000009307	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	0.965
LOC106560362	LOC106563760	ENSSSAP00000001029	ENSSSAP00000088671	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.907
LOC106560362	LOC106564723	ENSSSAP00000001029	ENSSSAP00000009817	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.864
LOC106560362	LOC106604910	ENSSSAP00000001029	ENSSSAP00000059694	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.907
LOC106560362	map3k1	ENSSSAP00000001029	ENSSSAP00000070395	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 1 isoform X2.	0.673
LOC106562896	ENSSSAP00000000211	ENSSSAP00000009307	ENSSSAP00000000211	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	annotation not available	0.673
LOC106562896	LOC106560362	ENSSSAP00000009307	ENSSSAP00000001029	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	LOC106563760	ENSSSAP00000009307	ENSSSAP00000088671	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.590
LOC106562896	LOC106564723	ENSSSAP00000009307	ENSSSAP00000009817	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.866
LOC106562896	LOC106576863	ENSSSAP00000009307	ENSSSAP00000115769	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.673
LOC106562896	LOC106579004	ENSSSAP00000009307	ENSSSAP00000074575	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	LOC106604910	ENSSSAP00000009307	ENSSSAP00000059694	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.957
LOC106562896	mapk10	ENSSSAP00000009307	ENSSSAP00000057910	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106562896	mapk8	ENSSSAP00000009307	ENSSSAP00000001404	Mitogen-activated protein kinase kinase kinase 1-like isoform X2.	Mitogen-activated protein kinase.	0.965
LOC106563760	ENSSSAP00000000211	ENSSSAP00000088671	ENSSSAP00000000211	Mitogen-activated protein kinase.	annotation not available	0.905