STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbof1Basal body-orientation factor 1 isoform X1. (522 aa)    
Predicted Functional Partners:
ccdc78
Coiled-coil domain-containing protein 78.
    
 
 0.629
colgalt2
Procollagen galactosyltransferase 2.
      
 0.576
LOC106584384
Procollagen galactosyltransferase 2-like.
      
 0.576
LOC106574623
Testis-specific gene 10 protein-like.
    
 
 0.537
cep135
Centrosomal protein of 135 kDa isoform X1.
    
 
 0.537
fbx36
F-box only protein 36.
      
 0.501
LOC106598179
F-box only protein 36-like.
      
 0.501
LOC100380684
Unconventional myosin-If; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.445
MYO1E-2
myosin-Ie; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.445
LOC106604590
Caltractin-like.
   
 0.443
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.