STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602752Cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like. (514 aa)    
Predicted Functional Partners:
CNGB1
Cyclic nucleotide-gated cation channel beta-1-like isoform X6.
  
0.979
calm2-4
Calmodulin 2 (Phosphorylase kinase, delta)-1; Belongs to the calmodulin family.
     
 0.930
LOC106597678
Calmodulin-like protein 4.
     
 0.917
call4
Calmodulin-like protein 4.
     
 0.917
cnga1
cGMP-gated cation channel alpha-1.
  
 
 
0.903
CNGB3-2
Cyclic nucleotide-gated cation channel beta-3-like.
  
0.822
CNGB3
Cyclic nucleotide-gated cation channel beta-3-like.
  
0.821
ENSSSAP00000098088
annotation not available
  
0.810
LOC106561447
Cyclic nucleotide-gated cation channel beta-1-like isoform X2.
  
0.809
LOC106573206
Cyclic nucleotide-gated cation channel beta-1-like isoform X1.
  
0.807
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.