ENSSSAP00000009864 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000009864

annotation not available (422 aa)

Predicted Functional Partners:

DOK7

0.943

DOK7-2

0.943

LOC106561901

0.723

LOC106587054

0.723

LOC106601548

0.698

LOC106572186

0.664

LOC106566949

0.664

ntf3

0.650

LOC106563519

0.647

LOC106587487

0.647

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DOK7	ENSSSAP00000009864	ENSSSAP00000010937	ENSSSAP00000009864	Protein Dok-7-like isoform X5.	annotation not available	0.943
DOK7	LOC106561901	ENSSSAP00000010937	ENSSSAP00000030156	Protein Dok-7-like isoform X5.	LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 4-like.	0.471
DOK7	LOC106566949	ENSSSAP00000010937	ENSSSAP00000072039	Protein Dok-7-like isoform X5.	Agrin-like isoform X2.	0.593
DOK7	LOC106572186	ENSSSAP00000010937	ENSSSAP00000056347	Protein Dok-7-like isoform X5.	Agrin-like isoform X6.	0.593
DOK7	LOC106587054	ENSSSAP00000010937	ENSSSAP00000077350	Protein Dok-7-like isoform X5.	Low-density lipoprotein receptor-related protein 4-like isoform X4.	0.471
DOK7-2	ENSSSAP00000009864	ENSSSAP00000031302	ENSSSAP00000009864	Protein Dok-7-like isoform X1.	annotation not available	0.943
DOK7-2	LOC106561901	ENSSSAP00000031302	ENSSSAP00000030156	Protein Dok-7-like isoform X1.	LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 4-like.	0.471
DOK7-2	LOC106566949	ENSSSAP00000031302	ENSSSAP00000072039	Protein Dok-7-like isoform X1.	Agrin-like isoform X2.	0.593
DOK7-2	LOC106572186	ENSSSAP00000031302	ENSSSAP00000056347	Protein Dok-7-like isoform X1.	Agrin-like isoform X6.	0.593
DOK7-2	LOC106587054	ENSSSAP00000031302	ENSSSAP00000077350	Protein Dok-7-like isoform X1.	Low-density lipoprotein receptor-related protein 4-like isoform X4.	0.471
ENSSSAP00000009864	DOK7	ENSSSAP00000009864	ENSSSAP00000010937	annotation not available	Protein Dok-7-like isoform X5.	0.943
ENSSSAP00000009864	DOK7-2	ENSSSAP00000009864	ENSSSAP00000031302	annotation not available	Protein Dok-7-like isoform X1.	0.943
ENSSSAP00000009864	LOC106561901	ENSSSAP00000009864	ENSSSAP00000030156	annotation not available	LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 4-like.	0.723
ENSSSAP00000009864	LOC106563519	ENSSSAP00000009864	ENSSSAP00000022174	annotation not available	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	0.647
ENSSSAP00000009864	LOC106566949	ENSSSAP00000009864	ENSSSAP00000072039	annotation not available	Agrin-like isoform X2.	0.664
ENSSSAP00000009864	LOC106572186	ENSSSAP00000009864	ENSSSAP00000056347	annotation not available	Agrin-like isoform X6.	0.664
ENSSSAP00000009864	LOC106587054	ENSSSAP00000009864	ENSSSAP00000077350	annotation not available	Low-density lipoprotein receptor-related protein 4-like isoform X4.	0.723
ENSSSAP00000009864	LOC106587487	ENSSSAP00000009864	ENSSSAP00000049919	annotation not available	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	0.647
ENSSSAP00000009864	LOC106601548	ENSSSAP00000009864	ENSSSAP00000002678	annotation not available	Uncharacterized protein LOC106601548; Belongs to the NGF-beta family.	0.698
ENSSSAP00000009864	ntf3	ENSSSAP00000009864	ENSSSAP00000066971	annotation not available	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.	0.650