STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nek10Serine/threonine-protein kinase Nek10. (1071 aa)    
Predicted Functional Partners:
cssa13h1orf194
Uncharacterized protein C1orf194 homolog.
    
 
 0.677
vwa8
Von Willebrand factor A domain-containing protein 8.
    
 0.637
LOC106610207
Kinesin-like protein KIF19 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.630
ift46
Intraflagellar transport protein 46 homolog isoform X1.
    
 
 0.609
MIB2
E3 ubiquitin-protein ligase MIB2-like isoform X1.
   
 0.607
LOC106566874
E3 ubiquitin-protein ligase MIB2-like.
   
 0.607
ap5m1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.598
LOC106612160
Cytochrome C oxidase assembly protein COX11, mitochondrial.
      
 0.595
LOC106584524
Non-muscle caldesmon-like isoform X4.
     
 0.595
LOC106563245
Colorectal mutant cancer protein-like isoform X1.
   
 
 0.574
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.