STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000009916Pseudouridine synthase 7 like. (359 aa)    
Predicted Functional Partners:
mtg1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
   0.902
gtpbp3
tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
   0.894
mrpl43
39S ribosomal protein L43, mitochondrial.
   
   0.894
malsu1
CG030 protein.
    
   0.891
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
    
   0.891
gtpbp8
GTP-binding protein 8.
    
   0.891
LOC106583459
RNA pseudouridylate synthase domain-containing protein 4-like.
    
 
 0.829
LOC106579040
LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog.
   
   0.815
ENSSSAP00000026134
RNA pseudouridine synthase domain containing 2.
    
 
 0.808
LOC106608717
RNA pseudouridylate synthase domain-containing protein 2-like isoform X1.
    
 
 0.808
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.