STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX7DNA-binding protein RFX7-like isoform X1. (1467 aa)    
Predicted Functional Partners:
rfxank
DNA-binding protein RFXANK.
    
 
 0.962
LOC106569021
Ankyrin repeat family A protein 2-like.
    
 
 0.920
ankra2
Ankyrin repeat family A protein 2.
    
 
 0.920
atr
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 
 0.687
ENSSSAP00000103411
annotation not available
    
 
 0.687
LOC106585648
Serine/threonine-protein kinase Chk2-like isoform X2.
   
 
 0.623
LOC106580118
Serine/threonine-protein kinase Chk2-like isoform X1.
   
 
 0.623
LOC106588339
DNA-binding protein RFX5-like isoform X2.
    
 
0.603
LOC106569903
DNA-binding protein RFX5-like isoform X1.
    
 
0.603
LOC106561413
Transcription factor RFX4-like isoform X1.
    
 
0.590
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.