STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598352Myeloma-overexpressed gene 2 protein homolog. (48 aa)    
Predicted Functional Partners:
LOC106568198
Cytochrome b-c1 complex subunit 9-like.
   
    0.638
cops3
COP9 signalosome complex subunit 3.
    
 
 0.593
cops3-2
COP9 constitutive photomorphogenic homolog subunit 3.
    
 
 0.593
UQCR10
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
    0.537
LOC106579522
COP9 constitutive photomorphogenic homolog subunit 5.
   
 
 0.536
cops5
COP9 signalosome complex subunit 5.
   
 
 0.536
csn6
COP9 signalosome complex subunit 6.
    
 
 0.496
COPS6
COP9 signalosome complex subunit 6.
    
 
 0.496
LOC106569596
NAD kinase-like isoform X1.
      
 0.483
NDUA2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
    0.481
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.