STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609794Glucoside xylosyltransferase 1-like isoform X1. (419 aa)    
Predicted Functional Partners:
LOC106582850
Glucoside xylosyltransferase 2-like.
  
  
 
0.902
LOC106565732
Glucoside xylosyltransferase 2-like isoform X2.
  
  
 
0.902
svbp
Coiled-coil domain-containing protein 23.
    
 0.673
rbm46
Probable RNA-binding protein 46.
      
 0.489
LOC106568020
Phosphoglycerate kinase.
      
 0.469
pgk
Phosphoglycerate kinase.
      
 0.469
LOC106599786
Exonuclease 3'-5' domain-containing protein 1-like isoform X2.
      
 0.463
LOC106611069
Exonuclease 3'-5' domain-containing protein 1-like.
      
 0.463
ENSSSAP00000012197
annotation not available
      
 0.442
poglut1
Protein O-glucosyltransferase 1.
      
 0.442
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.