STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602291Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like. (630 aa)    
Predicted Functional Partners:
LOC100286671
FAD synthase.
  
 0.992
ENSSSAP00000051341
annotation not available
  
 0.992
suox
Sulfite oxidase, mitochondrial isoform X2.
     
 0.907
LOC106570380
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.794
DHSA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like.
    
 0.794
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.794
cars2
Probable cysteine--tRNA ligase, mitochondrial.
    
 0.763
LOC106596591
Elongation factor 1-beta-like.
    
 0.763
sycc
cysteine--tRNA ligase, cytoplasmic.
    
 0.763
LOC106590608
Methionine synthase reductase-like.
  
 
 0.708
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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