STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598354Sterile alpha motif domain-containing protein 7-like. (615 aa)    
Predicted Functional Partners:
phc3
Polyhomeotic-like protein 3 isoform X1.
     
0.566
LOC100136941
Short wave-sensitive opsin 2.
     
 0.527
ENSSSAP00000061267
Opsin 1 (cone pigments), short-wave-sensitive 1.
     
 0.527
opn1sw
Short wavelength-sensitive 1 opsin.
     
 0.527
NR2E3
Photoreceptor-specific nuclear receptor-like.
   
  
 0.499
LOC106569596
NAD kinase-like isoform X1.
      
 0.470
SAMD14
Sterile alpha motif domain-containing protein 14-like.
      
 0.467
LOC106607513
Sterile alpha motif domain-containing protein 14-like.
      
 0.467
SAMD5
Sterile alpha motif domain containing 5.
      
 0.454
znf408
Zinc finger protein 408 isoform X1.
   
  
 0.454
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (30%) [HD]