cpsf6 protein (Salmo salar) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

cpsf6

Cleavage and polyadenylation specificity factor subunit 6 isoform X1. (647 aa)

Predicted Functional Partners:

LOC106562230

0.906

nudt21

0.906

LOC106587420

0.906

CPSF7

0.903

cpsf7

0.903

ENSSSAP00000120070

0.860

LOC106611711

0.855

cstf2

0.855

cstf1

0.840

PCF11

0.800

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF7	ENSSSAP00000120070	ENSSSAP00000060784	ENSSSAP00000120070	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	annotation not available	0.860
CPSF7	LOC106562230	ENSSSAP00000060784	ENSSSAP00000025512	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.906
CPSF7	LOC106587420	ENSSSAP00000060784	ENSSSAP00000120115	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage and polyadenylation specificity factor subunit 5-like.	0.906
CPSF7	LOC106611711	ENSSSAP00000060784	ENSSSAP00000084750	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage stimulation factor subunit 2-like isoform X1.	0.855
CPSF7	PCF11	ENSSSAP00000060784	ENSSSAP00000034860	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Pre-mRNA cleavage complex 2 protein Pcf11.	0.800
CPSF7	cpsf6	ENSSSAP00000060784	ENSSSAP00000009987	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage and polyadenylation specificity factor subunit 6 isoform X1.	0.903
CPSF7	cpsf7	ENSSSAP00000060784	ENSSSAP00000061049	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage and polyadenylation specificity factor subunit 7.	0.900
CPSF7	cstf1	ENSSSAP00000060784	ENSSSAP00000083375	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage stimulation factor subunit 1.	0.840
CPSF7	cstf2	ENSSSAP00000060784	ENSSSAP00000113076	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage stimulation factor subunit 2 isoform X1.	0.855
CPSF7	nudt21	ENSSSAP00000060784	ENSSSAP00000083096	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.906
ENSSSAP00000120070	CPSF7	ENSSSAP00000120070	ENSSSAP00000060784	annotation not available	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	0.860
ENSSSAP00000120070	LOC106611711	ENSSSAP00000120070	ENSSSAP00000084750	annotation not available	Cleavage stimulation factor subunit 2-like isoform X1.	0.829
ENSSSAP00000120070	PCF11	ENSSSAP00000120070	ENSSSAP00000034860	annotation not available	Pre-mRNA cleavage complex 2 protein Pcf11.	0.896
ENSSSAP00000120070	cpsf6	ENSSSAP00000120070	ENSSSAP00000009987	annotation not available	Cleavage and polyadenylation specificity factor subunit 6 isoform X1.	0.860
ENSSSAP00000120070	cpsf7	ENSSSAP00000120070	ENSSSAP00000061049	annotation not available	Cleavage and polyadenylation specificity factor subunit 7.	0.860
ENSSSAP00000120070	cstf1	ENSSSAP00000120070	ENSSSAP00000083375	annotation not available	Cleavage stimulation factor subunit 1.	0.852
ENSSSAP00000120070	cstf2	ENSSSAP00000120070	ENSSSAP00000113076	annotation not available	Cleavage stimulation factor subunit 2 isoform X1.	0.829
LOC106562230	CPSF7	ENSSSAP00000025512	ENSSSAP00000060784	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 7-like isoform X1.	0.906
LOC106562230	LOC106611711	ENSSSAP00000025512	ENSSSAP00000084750	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage stimulation factor subunit 2-like isoform X1.	0.885
LOC106562230	PCF11	ENSSSAP00000025512	ENSSSAP00000034860	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Pre-mRNA cleavage complex 2 protein Pcf11.	0.896