LOC106607046 protein (Salmo salar) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene fusions

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[Homology]

Score

LOC106607046

Kinetochore protein Spc24-like. (195 aa)

Predicted Functional Partners:

spc25

0.998

ENSSSAP00000030173

0.997

LOC106607422

0.995

nsl1

0.991

ndc80

0.989

NDC80

0.989

pmf1

0.988

mis12

0.985

LOC106600321

0.977

ENSSSAP00000103802

0.977

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000030173	ENSSSAP00000103802	ENSSSAP00000030173	ENSSSAP00000103802	annotation not available	annotation not available	0.998
ENSSSAP00000030173	LOC106600321	ENSSSAP00000030173	ENSSSAP00000092081	annotation not available	Kinetochore protein NDC80 homolog.	0.998
ENSSSAP00000030173	LOC106607046	ENSSSAP00000030173	ENSSSAP00000010018	annotation not available	Kinetochore protein Spc24-like.	0.997
ENSSSAP00000030173	LOC106607422	ENSSSAP00000030173	ENSSSAP00000010405	annotation not available	Uncharacterized protein LOC106607422 isoform X2.	0.999
ENSSSAP00000030173	NDC80	ENSSSAP00000030173	ENSSSAP00000103529	annotation not available	Kinetochore protein NDC80 homolog.	0.998
ENSSSAP00000030173	mis12	ENSSSAP00000030173	ENSSSAP00000016469	annotation not available	MIS12 homolog.	0.983
ENSSSAP00000030173	ndc80	ENSSSAP00000030173	ENSSSAP00000092043	annotation not available	Kinetochore protein NDC80 homolog.	0.998
ENSSSAP00000030173	nsl1	ENSSSAP00000030173	ENSSSAP00000094200	annotation not available	Kinetochore-associated protein NSL1 homolog isoform X1.	0.997
ENSSSAP00000030173	pmf1	ENSSSAP00000030173	ENSSSAP00000058962	annotation not available	Polyamine-modulated factor 1.	0.981
ENSSSAP00000030173	spc25	ENSSSAP00000030173	ENSSSAP00000045652	annotation not available	Kinetochore protein Spc25.	0.999
ENSSSAP00000103802	ENSSSAP00000030173	ENSSSAP00000103802	ENSSSAP00000030173	annotation not available	annotation not available	0.998
ENSSSAP00000103802	LOC106607046	ENSSSAP00000103802	ENSSSAP00000010018	annotation not available	Kinetochore protein Spc24-like.	0.977
ENSSSAP00000103802	LOC106607422	ENSSSAP00000103802	ENSSSAP00000010405	annotation not available	Uncharacterized protein LOC106607422 isoform X2.	0.985
ENSSSAP00000103802	mis12	ENSSSAP00000103802	ENSSSAP00000016469	annotation not available	MIS12 homolog.	0.954
ENSSSAP00000103802	nsl1	ENSSSAP00000103802	ENSSSAP00000094200	annotation not available	Kinetochore-associated protein NSL1 homolog isoform X1.	0.963
ENSSSAP00000103802	pmf1	ENSSSAP00000103802	ENSSSAP00000058962	annotation not available	Polyamine-modulated factor 1.	0.919
ENSSSAP00000103802	spc25	ENSSSAP00000103802	ENSSSAP00000045652	annotation not available	Kinetochore protein Spc25.	0.997
LOC106600321	ENSSSAP00000030173	ENSSSAP00000092081	ENSSSAP00000030173	Kinetochore protein NDC80 homolog.	annotation not available	0.998
LOC106600321	LOC106607046	ENSSSAP00000092081	ENSSSAP00000010018	Kinetochore protein NDC80 homolog.	Kinetochore protein Spc24-like.	0.977
LOC106600321	LOC106607422	ENSSSAP00000092081	ENSSSAP00000010405	Kinetochore protein NDC80 homolog.	Uncharacterized protein LOC106607422 isoform X2.	0.985